BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB004G03LP1|AL425280
(979 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1667 1922 0.0
>3x_Contig1667
Length = 12071
Score = 1922 bits (969), Expect = 0.0
Identities = 970/971 (99%)
Strand = Plus / Minus
Query: 9 aatcgcgattgttacaaagcagtaaagatacgaatgaagtagcattatttgagacactac 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1282 aatcgcgattgttacaaagcagtaaagatacgaatgaagtagcattatttgagacactac 1223
Query: 69 ttggtcttcatatatctgcaaatgctcaggatgccattacgttccatttcacttcaagga 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1222 ttggtcttcatatatctgcaaatgctcaggatgccattacgttccatttcacttcaagga 1163
Query: 129 ccgttgacgtcagtccacaattgtcgattactcttgatgtgtctcaagatacttataaaa 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1162 ccgttgacgtcagtccacaattgtcgattactcttgatgtgtctcaagatacttataaaa 1103
Query: 189 ttacagattcgaatcctaaattgcctcagattataaagaatgacttactaaacaatttag 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1102 ttacagattcgaatcctaaattgcctcagattataaagaatgacttactaaacaatttag 1043
Query: 249 cagctaccgatgaccttcgaagctttctcaaggctgcacgctcacatttgagtgccttaa 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1042 cagctaccgatgaccttcgaagctttctcaaggctgcacgctcacatttgagtgccttaa 983
Query: 309 ctgaagcaacttaagcctagaagcactaaaaaatgatacccggatactgacacgtgactt 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 982 ctgaagcaacttaagcctagaagcactaaaaaatgatacccggatactgacacgtgactt 923
Query: 369 gaaactgctccctttcccgtcgtttatcctcccgagatcaattcaatattatgagatatc 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 922 gaaactgctccctttcccgtcgtttatcctcccgagatcaattcaatattatgagatatc 863
Query: 429 attcagctgaagttcaacaaacacgctaaattgtatggtgttttgttggcagagacaaaa 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 862 attcagctgaagttcaacaaacacgctaaattgtatggtgttttgttggcagagacaaaa 803
Query: 489 acaccttcataggcaatatagttaagatcaaactggtcgtttttattcagtatacgatta 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 acaccttcataggcaatatagttaagatcaaactggtcgtttttattcagtatacgatta 743
Query: 549 tcgttttgtattaatagatcctcttgaggagagtgggaagaacgtggaatgcttaatgca 608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 tcgttttgtattaatagatcctcttgaggagagtgggaagaacgtggaatgcttaatgca 683
Query: 609 actaagaggttagcttgtctgtcatttttcgtgtatgtctcactagcatcgccaggagat 668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 actaagaggttagcttgtctgtcatttttcgtgtatgtctcactagcatcgccaggagat 623
Query: 669 agactaccggaattttcggactgtgttagggcctgtgaagtggtgcgtcattgtacagat 728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 agactaccggaattttcggactgtgttagggcctgtgaagtggtgcgtcattgtacagat 563
Query: 729 cggtttgaagaagattcgtttaatcccttcatcaatgagcaattttctgaaccagcatta 788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 cggtttgaagaagattcgtttaatcccttcatcaatgagcaattttctgaaccagcatta 503
Query: 789 gtgtataaggctttactatgggattgcaccagtgattgtgattatcaatgtcaacagaaa 848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 gtgtataaggctttactatgggattgcaccagtgattgtgattatcaatgtcaacagaaa 443
Query: 849 ataactttagatagagaggaaaggaacgaggacatctaccagttccatggaaaatggcca 908
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ataactttagatagagaggaaaggaacgaggacatctaccagttccatggaaaatggcca 383
Query: 909 ttcaaaagagttcttggaatgcaggaattttactccacaawtttttccatttgcaatttc 968
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 382 ttcaaaagagttcttggaatgcaggaattttactccacaattttttccatttgcaatttc 323
Query: 969 gttcctcatta 979
|||||||||||
Sbjct: 322 gttcctcatta 312
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6617
Number of Sequences: 1807
Number of extensions: 6617
Number of successful extensions: 31
Number of sequences better than 1.0e-20: 1
length of query: 979
length of database: 10,358,551
effective HSP length: 16
effective length of query: 963
effective length of database: 10,329,639
effective search space: 9947442357
effective search space used: 9947442357
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)